Create the metabolic model folder structure necessary for BacMicroSim as follows:
1. Use the COBRA function to create pan models at the species level using the AGORA models and the function createPanModels. Place all the
created pan models in the Species folder.
3. Repeat the process to populate the Genus, Family, Order, Class and Phylum folders with pan models at these taxonomic levels.
4. Copy all the AGORA models into the Strain folder.
5. Copy all the models from the Strain, Species, Genus, Family, Order, Class and Phylum folders into the allModels folder.